Merge pull request #2998 from Josh-Voyles/mem-fix-2

fix: deterministically finalize SQLite prepared statements to prevent native memory leak (#2120)
This commit is contained in:
Owen Schwartz
2026-05-04 17:29:45 -07:00
committed by GitHub
3 changed files with 94 additions and 7 deletions

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@@ -1,5 +1,6 @@
import { drizzle as DrizzleSqlite } from "drizzle-orm/better-sqlite3";
import Database from "better-sqlite3";
import type BetterSqlite3 from "better-sqlite3";
import * as schema from "./schema/schema";
import path from "path";
import fs from "fs";
@@ -11,8 +12,68 @@ export const exists = checkFileExists(location);
bootstrapVolume();
/**
* Wraps better-sqlite3 Statement to call `finalize()` immediately after
* execution, freeing native sqlite3_stmt memory deterministically instead
* of waiting for GC. Fixes steady off-heap growth under load (#2120).
* WARNING: Finalizes after first execution — incompatible with drizzle's
* reusable .prepare() builders. No such usage exists in this codebase.
*/
function autoFinalizeStatement(
stmt: BetterSqlite3.Statement
): BetterSqlite3.Statement {
const wrapExec = <T extends (...args: any[]) => any>(fn: T): T => {
return function (this: any, ...args: any[]) {
try {
return fn.apply(this, args);
} finally {
try {
// finalize() exists on the native Statement at runtime but
// is missing from @types/better-sqlite3.
(stmt as any).finalize();
} catch {
// Already finalized — harmless
}
}
} as unknown as T;
};
stmt.run = wrapExec(stmt.run);
stmt.get = wrapExec(stmt.get);
stmt.all = wrapExec(stmt.all);
return stmt;
}
function createDb() {
const sqlite = new Database(location);
// Enable WAL mode — allows concurrent readers + single writer, preventing
// contention across subsystems (verifySession, Traefik, audit, ping).
sqlite.pragma("journal_mode = WAL");
// Wait up to 5s on SQLITE_BUSY instead of failing — prevents audit log
// retry loops that accumulate memory.
sqlite.pragma("busy_timeout = 5000");
// NORMAL sync mode: safe with WAL, reduces write lock hold time.
sqlite.pragma("synchronous = NORMAL");
// 64 MB page cache (default 2 MB) — reduces I/O round-trips on large
// TraefikConfigManager JOINs that block the event loop.
sqlite.pragma("cache_size = -65536");
// 256 MB memory-mapped I/O — OS serves reads from page cache directly,
// reducing event-loop blocking.
sqlite.pragma("mmap_size = 268435456");
// Wrap prepare() so every drizzle-orm statement is auto-finalized after
// first use, preventing sqlite3_stmt accumulation between GC cycles.
const originalPrepare = sqlite.prepare.bind(sqlite);
(sqlite as any).prepare = function autoFinalizePrepare(source: string) {
return autoFinalizeStatement(originalPrepare(source));
};
return DrizzleSqlite(sqlite, {
schema
});
@@ -23,7 +84,7 @@ export default db;
export const primaryDb = db;
export type Transaction = Parameters<
Parameters<(typeof db)["transaction"]>[0]
>[0];
>[0];
export const DB_TYPE: "pg" | "sqlite" = "sqlite";
function checkFileExists(filePath: string): boolean {

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@@ -22,7 +22,7 @@ import {
Olm,
olms,
RemoteExitNode,
remoteExitNodes,
remoteExitNodes
} from "@server/db";
import { eq } from "drizzle-orm";
import { db } from "@server/db";
@@ -194,8 +194,6 @@ const connectedClients: Map<string, AuthenticatedWebSocket[]> = new Map();
// Config version tracking map (local to this node, resets on server restart)
const clientConfigVersions: Map<string, number> = new Map();
// Recovery tracking
let isRedisRecoveryInProgress = false;
@@ -406,6 +404,9 @@ const removeClient = async (
const updatedClients = existingClients.filter((client) => client !== ws);
if (updatedClients.length === 0) {
connectedClients.delete(mapKey);
// Remove clientId from clientConfigVersions on disconnect — prevents
// unbounded memory growth from stale entries.
clientConfigVersions.delete(clientId);
if (redisManager.isRedisEnabled()) {
try {
@@ -1097,6 +1098,11 @@ const disconnectClient = async (clientId: string): Promise<boolean> => {
}
});
// Eagerly remove client — close event may not fire if socket is already
// CLOSING, leaving zombie entries.
connectedClients.delete(mapKey);
clientConfigVersions.delete(clientId);
return true;
};

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@@ -3,7 +3,15 @@ import zlib from "zlib";
import { Server as HttpServer } from "http";
import { WebSocket, WebSocketServer } from "ws";
import { Socket } from "net";
import { Newt, newts, NewtSession, olms, Olm, OlmSession, sites } from "@server/db";
import {
Newt,
newts,
NewtSession,
olms,
Olm,
OlmSession,
sites
} from "@server/db";
import { eq } from "drizzle-orm";
import { db } from "@server/db";
import { recordPing } from "@server/routers/newt/pingAccumulator";
@@ -80,6 +88,9 @@ const removeClient = async (
const updatedClients = existingClients.filter((client) => client !== ws);
if (updatedClients.length === 0) {
connectedClients.delete(mapKey);
// Remove clientId from clientConfigVersions — prevents unbounded growth
// from stale entries.
clientConfigVersions.delete(clientId);
logger.info(
`All connections removed for ${clientType.toUpperCase()} ID: ${clientId}`
@@ -218,9 +229,13 @@ const hasActiveConnections = async (clientId: string): Promise<boolean> => {
};
// Get the current config version for a client
const getClientConfigVersion = async (clientId: string): Promise<number | undefined> => {
const getClientConfigVersion = async (
clientId: string
): Promise<number | undefined> => {
const version = clientConfigVersions.get(clientId);
logger.debug(`getClientConfigVersion called for clientId: ${clientId}, returning: ${version} (type: ${typeof version})`);
logger.debug(
`getClientConfigVersion called for clientId: ${clientId}, returning: ${version} (type: ${typeof version})`
);
return version;
};
@@ -507,6 +522,11 @@ const disconnectClient = async (clientId: string): Promise<boolean> => {
}
});
// Eagerly remove client — close event may not fire if socket already
// CLOSING, leaving zombie entries.
connectedClients.delete(mapKey);
clientConfigVersions.delete(clientId);
return true;
};