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Not able to migrate from ferretDBv1 sqllite to ferretDBv2 #458

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opened 2025-10-31 15:12:35 -05:00 by GiteaMirror · 1 comment
GiteaMirror commented 2025-10-31 15:12:35 -05:00
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Originally created by @Floo33R on GitHub (Jul 5, 2025).

Hi,
i have an issue to migrate to the new version. I didn't realize there are new images out and now i am not able to get the new DB up and running.

My docker-compose.yml looks like this:

###################################
# 🦎 KOMODO COMPOSE - POSTGRES 🦎 #
###################################

## This compose file will deploy:
##   1. Sqlite + FerretDB Mongo adapter (https://www.ferretdb.com)
##   2. Komodo Core
##   3. Komodo Periphery

services:


  copy_database:
    image: ghcr.io/moghtech/komodo-util
    environment:
      MODE: CopyDatabase
      SOURCE_URI: mongodb://ferretdb:27017
      SOURCE_DB_NAME: ${KOMODO_DATABASE_DB_NAME:-komodo}
      TARGET_URI: mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb2:27017
      TARGET_DB_NAME: ${KOMODO_DATABASE_DB_NAME:-komodo}
    networks:
      - komodo

  postgres2:
    # Recommended: Pin to a specific version
    # https://github.com/FerretDB/documentdb/pkgs/container/postgres-documentdb
    image: ghcr.io/ferretdb/postgres-documentdb
    labels:
      komodo.skip: # Prevent Komodo from stopping with StopAllContainers
    restart: unless-stopped
    # ports:
    #   - 5432:5432
    volumes:
      - /opt/komodo/postgres-data:/var/lib/postgresql/data
    environment:
      POSTGRES_USER: ${KOMODO_DB_USERNAME}
      POSTGRES_PASSWORD: ${KOMODO_DB_PASSWORD}
      POSTGRES_DB: postgres # Do not change
    networks:
      - komodo

  ferretdb2:
    # Recommended: Pin to a specific version
    # https://github.com/FerretDB/FerretDB/pkgs/container/ferretdb
    image: ghcr.io/ferretdb/ferretdb
    labels:
      komodo.skip: # Prevent Komodo from stopping with StopAllContainers
    restart: unless-stopped
    depends_on:
      - postgres2
    # ports:
    #    - 27017:27017
    volumes:
      - /opt/komodo/ferretdb-state:/state
    environment:
      FERRETDB_POSTGRESQL_URL: postgres://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@postgres2:5432/postgres
    networks:
      - komodo




  ferretdb:
    container_name: komodo-ferretdb
    image: ghcr.io/ferretdb/ferretdb:1
    #user: "1001:999"
    labels:
      - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers
    restart: unless-stopped
    logging:
      driver: ${COMPOSE_LOGGING_DRIVER:-local}
    networks:
      - komodo
    ports:
      - 27017:27017
    volumes:
      - /opt/komodo/sqlite-data:/state
    environment:
      - FERRETDB_HANDLER=sqlite
  
  core:
    container_name: komodo-core
    image: ghcr.io/mbecker20/komodo:${COMPOSE_KOMODO_IMAGE_TAG:-latest}
    #user: "1001:999"
    labels:
      - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers
      - "com.centurylinklabs.watchtower.monitor-only=true"
    restart: unless-stopped
    depends_on:
      - ferretdb
    logging:
      driver: ${COMPOSE_LOGGING_DRIVER:-local}
    networks:
      - komodo
      - proxy
    ports:
      - 9120:9120
    env_file: stack.env
    environment:
      KOMODO_DATABASE_ADDRESS: ferretdb
    volumes:
      ## Core cache for repos for latest commit hash / contents
      - /opt/komodo/repo-cache:/repo-cache
      ## Store sync files on server
      # - /path/to/syncs:/syncs
      ## Optionally mount a custom core.config.toml
      # - /path/to/core.config.toml:/config/config.toml
    ## Allows for systemd Periphery connection at 
    ## "http://host.docker.internal:8120"
    # extra_hosts:
    #   - host.docker.internal:host-gateway

  ## Deploy Periphery container using this block,
  ## or deploy the Periphery binary with systemd using 
  ## https://github.com/mbecker20/komodo/tree/main/scripts
  periphery:
    container_name: komodo-periphery
    image: ghcr.io/mbecker20/periphery:${COMPOSE_KOMODO_IMAGE_TAG:-latest}
    security_opt:
      - apparmor=unconfined  # Allow unconfined AppArmor
    #user: "1001:999"
    labels:
      - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers
    restart: unless-stopped
    logging:
      driver: ${COMPOSE_LOGGING_DRIVER:-local}
    networks:
      - komodo
    env_file: stack.env
    volumes:
      ## Mount external docker socket
      - /var/run/docker.sock:/var/run/docker.sock
      ## Allow Periphery to see processes outside of container
      - /proc:/proc
      ## use self signed certs in docker volume, 
      ## or mount your own signed certs.
      - /opt/komodo/ssl-certs:/etc/komodo/ssl
      ## manage repos in a docker volume, 
      ## or change it to an accessible host directory.
      - /opt/komodo/repos:/etc/komodo/repos
      ## manage stack files in a docker volume, 
      ## or change it to an accessible host directory.
      - /opt/komodo/stacks:/etc/komodo/stacks
      ## Optionally mount a path to store compose files
      - /opt/komodo/compose:/host/compose

networks:
  komodo:
  proxy:
    external: true

When i try to migrate, the copy_database container always writes following error:

2025-07-05T17:20:50.780701653Z Error: Invalid SOURCE_URI

I tried already several different SOURCE_URIs, but it seems like i can't find the right one.

  • mongodb://ferretdb:27017
  • mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb:27017
  • mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb:27017/?authMechanism=PLAIN

Can someone help me out here?

Originally created by @Floo33R on GitHub (Jul 5, 2025). Hi, i have an issue to migrate to the new version. I didn't realize there are new images out and now i am not able to get the new DB up and running. My `docker-compose.yml` looks like this: ``` ################################### # 🦎 KOMODO COMPOSE - POSTGRES 🦎 # ################################### ## This compose file will deploy: ## 1. Sqlite + FerretDB Mongo adapter (https://www.ferretdb.com) ## 2. Komodo Core ## 3. Komodo Periphery services: copy_database: image: ghcr.io/moghtech/komodo-util environment: MODE: CopyDatabase SOURCE_URI: mongodb://ferretdb:27017 SOURCE_DB_NAME: ${KOMODO_DATABASE_DB_NAME:-komodo} TARGET_URI: mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb2:27017 TARGET_DB_NAME: ${KOMODO_DATABASE_DB_NAME:-komodo} networks: - komodo postgres2: # Recommended: Pin to a specific version # https://github.com/FerretDB/documentdb/pkgs/container/postgres-documentdb image: ghcr.io/ferretdb/postgres-documentdb labels: komodo.skip: # Prevent Komodo from stopping with StopAllContainers restart: unless-stopped # ports: # - 5432:5432 volumes: - /opt/komodo/postgres-data:/var/lib/postgresql/data environment: POSTGRES_USER: ${KOMODO_DB_USERNAME} POSTGRES_PASSWORD: ${KOMODO_DB_PASSWORD} POSTGRES_DB: postgres # Do not change networks: - komodo ferretdb2: # Recommended: Pin to a specific version # https://github.com/FerretDB/FerretDB/pkgs/container/ferretdb image: ghcr.io/ferretdb/ferretdb labels: komodo.skip: # Prevent Komodo from stopping with StopAllContainers restart: unless-stopped depends_on: - postgres2 # ports: # - 27017:27017 volumes: - /opt/komodo/ferretdb-state:/state environment: FERRETDB_POSTGRESQL_URL: postgres://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@postgres2:5432/postgres networks: - komodo ferretdb: container_name: komodo-ferretdb image: ghcr.io/ferretdb/ferretdb:1 #user: "1001:999" labels: - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers restart: unless-stopped logging: driver: ${COMPOSE_LOGGING_DRIVER:-local} networks: - komodo ports: - 27017:27017 volumes: - /opt/komodo/sqlite-data:/state environment: - FERRETDB_HANDLER=sqlite core: container_name: komodo-core image: ghcr.io/mbecker20/komodo:${COMPOSE_KOMODO_IMAGE_TAG:-latest} #user: "1001:999" labels: - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers - "com.centurylinklabs.watchtower.monitor-only=true" restart: unless-stopped depends_on: - ferretdb logging: driver: ${COMPOSE_LOGGING_DRIVER:-local} networks: - komodo - proxy ports: - 9120:9120 env_file: stack.env environment: KOMODO_DATABASE_ADDRESS: ferretdb volumes: ## Core cache for repos for latest commit hash / contents - /opt/komodo/repo-cache:/repo-cache ## Store sync files on server # - /path/to/syncs:/syncs ## Optionally mount a custom core.config.toml # - /path/to/core.config.toml:/config/config.toml ## Allows for systemd Periphery connection at ## "http://host.docker.internal:8120" # extra_hosts: # - host.docker.internal:host-gateway ## Deploy Periphery container using this block, ## or deploy the Periphery binary with systemd using ## https://github.com/mbecker20/komodo/tree/main/scripts periphery: container_name: komodo-periphery image: ghcr.io/mbecker20/periphery:${COMPOSE_KOMODO_IMAGE_TAG:-latest} security_opt: - apparmor=unconfined # Allow unconfined AppArmor #user: "1001:999" labels: - "services.core.labels.komodo.skip=true" # Prevent Komodo from stopping with StopAllContainers restart: unless-stopped logging: driver: ${COMPOSE_LOGGING_DRIVER:-local} networks: - komodo env_file: stack.env volumes: ## Mount external docker socket - /var/run/docker.sock:/var/run/docker.sock ## Allow Periphery to see processes outside of container - /proc:/proc ## use self signed certs in docker volume, ## or mount your own signed certs. - /opt/komodo/ssl-certs:/etc/komodo/ssl ## manage repos in a docker volume, ## or change it to an accessible host directory. - /opt/komodo/repos:/etc/komodo/repos ## manage stack files in a docker volume, ## or change it to an accessible host directory. - /opt/komodo/stacks:/etc/komodo/stacks ## Optionally mount a path to store compose files - /opt/komodo/compose:/host/compose networks: komodo: proxy: external: true ``` When i try to migrate, the `copy_database` container always writes following error: ``` 2025-07-05T17:20:50.780701653Z Error: Invalid SOURCE_URI ``` I tried already several different `SOURCE_URIs`, but it seems like i can't find the right one. - `mongodb://ferretdb:27017` - `mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb:27017` - `mongodb://${KOMODO_DB_USERNAME}:${KOMODO_DB_PASSWORD}@ferretdb:27017/?authMechanism=PLAIN` Can someone help me out here?
GiteaMirror commented 2025-10-31 15:12:36 -05:00
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@Floo33R commented on GitHub (Jul 5, 2025):

After some research, i found out, what i have to put in:
SOURCE_URI: "mongodb://ferretdb:27017/?directConnection=true"
I hope this helps someone.

@Floo33R commented on GitHub (Jul 5, 2025): After some research, i found out, what i have to put in: `SOURCE_URI: "mongodb://ferretdb:27017/?directConnection=true"` I hope this helps someone.
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